RSXS.md

@@ -19,7 +19,7 @@
 
 <br>
 
-## Detectors
+## detectors
 
 
 | Name 	| Description    | Ang. acceptance<br>HxV (deg)    | Offset 	    | Max tth 	| Det Num 	|  Det/ $I_0$ Num 	|
@@ -44,7 +44,7 @@ See below for a complete list of signals recorded during a scan and their corres
 
 <br>
 
-## Energy
+## energy
 
 
 ```python
@@ -68,7 +68,7 @@ scanXAS_BL(E_Ti,mcp=True,m3r=True);plot_latest()
 ```
 <br>
 
-# Diffractometer
+# diffractometer
 
 - m1 = kphi   
 - m2 = x
@@ -92,7 +92,7 @@ sample(mysample)    # moves to mysample, does not move tth
 ```
 <br>
 
-# Motor Scans
+# motor scans
 
 ```python
 scanx(-500,500,50)     # absolute scan (start,stop,step)
@@ -112,7 +112,7 @@ Clear_Scan_Positioners('Kappa')       # remove extra positioner (eg after th2th
 
 <br>
 
-# SRS setup
+# srs setup
 
 With shutter close or slit at 0 (faster), 'INPUT OFFSET' set 'ON' and 'UNCAL'
 - make sure the count goes down (not up) when closing the shutter! If the count goes up without beam, change the INVERT ON/OFF - as of 2021_2 all of our SRSs are INVERT ON (D3/D4/TEY/mesh) 
@@ -125,7 +125,7 @@ With shutter close or slit at 0 (faster), 'INPUT OFFSET' set 'ON' and 'UNCAL'
 
 <br>
 
-# MCP
+# mcp (area detector)
 ```python
 MPA_HV_ON()
 MPA_HV_Set(2975)
@@ -142,7 +142,7 @@ roi=4;  MPA_ROI_SetUp(535,539,400,400,roi)  #set up ROI4 = 400x400 at the center
 
 <br>
 
-# Vortex
+# vortex
 For detailed instructions see [manual here](https://git.aps.anl.gov/rodolakis/Macros_29id/-/wikis/RSXS/vortex).
 
 
@@ -166,9 +166,9 @@ mcascan(add_vortex=False) # chooses to ignore vortex channels and removes them f
 
 <br>
 
-# Plot
+# analysis
 
-## Using basic mda plots:
+## basic mda plots:
 ```python
 # n1,n2,n3 is a scan number
 # d1,d2,d3 is a detector number  - see table below
@@ -192,7 +192,7 @@ fit_centroid(n)        # to calculate avg centroid position during scan n
 ```
 
 
-## Using nData
+## nData
 ```python
 from Macros_29id.IEX_nData import *
 
@@ -219,7 +219,7 @@ plt.show()
 ```
 
 
-## Using mdaFile
+## mdaFile
 ```python
 mydata=mdaFile(1,3)   # loads mda scans 1 to 3
 mydata.update(4)      # loads another scan
@@ -230,7 +230,7 @@ mydata.header[3].UB   # return dictionary of UB metadata
 
 <br>
 
-# Detector Number
+# detector number
 
 | Detector 	| Det Number Raw signal 	| Det Number Det/I0 	|                      Description                      	|             PV             	| Controller 	|
 |:--------:	|:---------------------:	|:-------------------:	|:-----------------------------------------------------:	|:--------------------------:	|:----------:	|